Models, code, and papers for "Kevin Wu":

Learning Scene Gist with Convolutional Neural Networks to Improve Object Recognition

Jun 09, 2018
Kevin Wu, Eric Wu, Gabriel Kreiman

Advancements in convolutional neural networks (CNNs) have made significant strides toward achieving high performance levels on multiple object recognition tasks. While some approaches utilize information from the entire scene to propose regions of interest, the task of interpreting a particular region or object is still performed independently of other objects and features in the image. Here we demonstrate that a scene's 'gist' can significantly contribute to how well humans can recognize objects. These findings are consistent with the notion that humans foveate on an object and incorporate information from the periphery to aid in recognition. We use a biologically inspired two-part convolutional neural network ('GistNet') that models the fovea and periphery to provide a proof-of-principle demonstration that computational object recognition can significantly benefit from the gist of the scene as contextual information. Our model yields accuracy improvements of up to 50% in certain object categories when incorporating contextual gist, while only increasing the original model size by 5%. This proposed model mirrors our intuition about how the human visual system recognizes objects, suggesting specific biologically plausible constraints to improve machine vision and building initial steps towards the challenge of scene understanding.


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Conditional Infilling GANs for Data Augmentation in Mammogram Classification

Aug 24, 2018
Eric Wu, Kevin Wu, David Cox, William Lotter

Deep learning approaches to breast cancer detection in mammograms have recently shown promising results. However, such models are constrained by the limited size of publicly available mammography datasets, in large part due to privacy concerns and the high cost of generating expert annotations. Limited dataset size is further exacerbated by substantial class imbalance since "normal" images dramatically outnumber those with findings. Given the rapid progress of generative models in synthesizing realistic images, and the known effectiveness of simple data augmentation techniques (e.g. horizontal flipping), we ask if it is possible to synthetically augment mammogram datasets using generative adversarial networks (GANs). We train a class-conditional GAN to perform contextual in-filling, which we then use to synthesize lesions onto healthy screening mammograms. First, we show that GANs are capable of generating high-resolution synthetic mammogram patches. Next, we experimentally evaluate using the augmented dataset to improve breast cancer classification performance. We observe that a ResNet-50 classifier trained with GAN-augmented training data produces a higher AUROC compared to the same model trained only on traditionally augmented data, demonstrating the potential of our approach.

* To appear in MICCAI 2018, Breast Image Analysis Workshop 

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A Deep Belief Network Based Machine Learning System for Risky Host Detection

Dec 29, 2017
Wangyan Feng, Shuning Wu, Xiaodan Li, Kevin Kunkle

To assure cyber security of an enterprise, typically SIEM (Security Information and Event Management) system is in place to normalize security event from different preventive technologies and flag alerts. Analysts in the security operation center (SOC) investigate the alerts to decide if it is truly malicious or not. However, generally the number of alerts is overwhelming with majority of them being false positive and exceeding the SOC's capacity to handle all alerts. There is a great need to reduce the false positive rate as much as possible. While most previous research focused on network intrusion detection, we focus on risk detection and propose an intelligent Deep Belief Network machine learning system. The system leverages alert information, various security logs and analysts' investigation results in a real enterprise environment to flag hosts that have high likelihood of being compromised. Text mining and graph based method are used to generate targets and create features for machine learning. In the experiment, Deep Belief Network is compared with other machine learning algorithms, including multi-layer neural network, random forest, support vector machine and logistic regression. Results on real enterprise data indicate that the deep belief network machine learning system performs better than other algorithms for our problem and is six times more effective than current rule-based system. We also implement the whole system from data collection, label creation, feature engineering to host score generation in a real enterprise production environment.

* 10 pages, 10 figures. The paper is accepted by IEEE Conference on Communications and Network Security 2017. However, it is not published because either of the authors showed up in the conference 

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Competing Bandits: The Perils of Exploration under Competition

Feb 14, 2019
Guy Aridor, Kevin Liu, Aleksandrs Slivkins, Zhiwei Steven Wu

We empirically study the interplay between exploration and competition. Systems that learn from interactions with users often engage in exploration: making potentially suboptimal decisions in order to acquire new information for future decisions. However, when multiple systems are competing for the same market of users, exploration may hurt a system's reputation in the near term, with adverse competitive effects. In particular, a system may enter a "death spiral", when the short-term reputation cost decreases the number of users for the system to learn from, which degrades its performance relative to competition and further decreases its market share. We ask whether better exploration algorithms are incentivized under competition. We run extensive numerical experiments in a stylized duopoly model in which two firms deploy multi-armed bandit algorithms and compete for myopic users. We find that duopoly and monopoly tend to favor a primitive "greedy algorithm" that does not explore and leads to low consumer welfare, whereas a temporary monopoly (a duopoly with an early entrant) may incentivize better bandit algorithms and lead to higher consumer welfare. Our findings shed light on the first-mover advantage in the digital economy by exploring the role that data can play as a barrier to entry in online markets.


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Privacy preserving Neural Network Inference on Encrypted Data with GPUs

Nov 26, 2019
Daniel Takabi, Robert Podschwadt, Jeff Druce, Curt Wu, Kevin Procopio

Machine Learning as a Service (MLaaS) has become a growing trend in recent years and several such services are currently offered. MLaaS is essentially a set of services that provides machine learning tools and capabilities as part of cloud computing services. In these settings, the cloud has pre-trained models that are deployed and large computing capacity whereas the clients can use these models to make predictions without having to worry about maintaining the models and the service. However, the main concern with MLaaS is the privacy of the client's data. Although there have been several proposed approaches in the literature to run machine learning models on encrypted data, the performance is still far from being satisfactory for practical use. In this paper, we aim to accelerate the performance of running machine learning on encrypted data using combination of Fully Homomorphic Encryption (FHE), Convolutional Neural Networks (CNNs) and Graphics Processing Units (GPUs). We use a number of optimization techniques, and efficient GPU-based implementation to achieve high performance. We evaluate a CNN whose architecture is similar to AlexNet to classify homomorphically encrypted samples from the Cars Overhead With Context (COWC) dataset. To the best of our knowledge, it is the first time such a complex network and large dataset is evaluated on encrypted data. Our approach achieved reasonable classification accuracy of 95% for the COWC dataset. In terms of performance, our results show that we could achieve several thousands times speed up when we implement GPU-accelerated FHE operations on encrypted floating point numbers.


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Real-time Scene Segmentation Using a Light Deep Neural Network Architecture for Autonomous Robot Navigation on Construction Sites

Jan 24, 2019
Khashayar Asadi, Pengyu Chen, Kevin Han, Tianfu Wu, Edgar Lobaton

Camera-equipped unmanned vehicles (UVs) have received a lot of attention in data collection for construction monitoring applications. To develop an autonomous platform, the UV should be able to process multiple modules (e.g., context-awareness, control, localization, and mapping) on an embedded platform. Pixel-wise semantic segmentation provides a UV with the ability to be contextually aware of its surrounding environment. However, in the case of mobile robotic systems with limited computing resources, the large size of the segmentation model and high memory usage requires high computing resources, which a major challenge for mobile UVs (e.g., a small-scale vehicle with limited payload and space). To overcome this challenge, this paper presents a light and efficient deep neural network architecture to run on an embedded platform in real-time. The proposed model segments navigable space on an image sequence (i.e., a video stream), which is essential for an autonomous vehicle that is based on machine vision. The results demonstrate the performance efficiency of the proposed architecture compared to the existing models and suggest possible improvements that could make the model even more efficient, which is necessary for the future development of the autonomous robotics systems.

* The 2019 ASCE International Conference on Computing in Civil Engineering 

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Mixed Membership Recurrent Neural Networks

Dec 23, 2018
Ghazal Fazelnia, Mark Ibrahim, Ceena Modarres, Kevin Wu, John Paisley

Models for sequential data such as the recurrent neural network (RNN) often implicitly model a sequence as having a fixed time interval between observations and do not account for group-level effects when multiple sequences are observed. We propose a model for grouped sequential data based on the RNN that accounts for varying time intervals between observations in a sequence by learning a group-level base parameter to which each sequence can revert. Our approach is motivated by the mixed membership framework, and we show how it can be used for dynamic topic modeling in which the distribution on topics (not the topics themselves) are evolving in time. We demonstrate our approach on a dataset of 3.4 million online grocery shopping orders made by 206K customers.


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Stochastic Prediction of Multi-Agent Interactions from Partial Observations

Feb 25, 2019
Chen Sun, Per Karlsson, Jiajun Wu, Joshua B Tenenbaum, Kevin Murphy

We present a method that learns to integrate temporal information, from a learned dynamics model, with ambiguous visual information, from a learned vision model, in the context of interacting agents. Our method is based on a graph-structured variational recurrent neural network (Graph-VRNN), which is trained end-to-end to infer the current state of the (partially observed) world, as well as to forecast future states. We show that our method outperforms various baselines on two sports datasets, one based on real basketball trajectories, and one generated by a soccer game engine.

* ICLR 2019 camera ready 

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SlugNERDS: A Named Entity Recognition Tool for Open Domain Dialogue Systems

May 10, 2018
Kevin K. Bowden, Jiaqi Wu, Shereen Oraby, Amita Misra, Marilyn Walker

In dialogue systems, the tasks of named entity recognition (NER) and named entity linking (NEL) are vital preprocessing steps for understanding user intent, especially in open domain interaction where we cannot rely on domain-specific inference. UCSC's effort as one of the funded teams in the 2017 Amazon Alexa Prize Contest has yielded Slugbot, an open domain social bot, aimed at casual conversation. We discovered several challenges specifically associated with both NER and NEL when building Slugbot, such as that the NE labels are too coarse-grained or the entity types are not linked to a useful ontology. Moreover, we have discovered that traditional approaches do not perform well in our context: even systems designed to operate on tweets or other social media data do not work well in dialogue systems. In this paper, we introduce Slugbot's Named Entity Recognition for dialogue Systems (SlugNERDS), a NER and NEL tool which is optimized to address these issues. We describe two new resources that we are building as part of this work: SlugEntityDB and SchemaActuator. We believe these resources will be useful for the research community.

* Kevin K. Bowden, Jiaqi Wu, Shereen Oraby, Amita Misra, and Marilyn Walker. SlugNERDS: A Named Entity Recognition Tool for Open Domain Dialogue Systems. Language Resources and Evaluation Conference (LREC), Miyazaki, Japan, 2018 
* Resources can be found: https://nlds.soe.ucsc.edu/node/56 

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Slugbot: An Application of a Novel and Scalable Open Domain Socialbot Framework

Jan 04, 2018
Kevin K. Bowden, Jiaqi Wu, Shereen Oraby, Amita Misra, Marilyn Walker

In this paper we introduce a novel, open domain socialbot for the Amazon Alexa Prize competition, aimed at carrying on friendly conversations with users on a variety of topics. We present our modular system, highlighting our different data sources and how we use the human mind as a model for data management. Additionally we build and employ natural language understanding and information retrieval tools and APIs to expand our knowledge bases. We describe our semistructured, scalable framework for crafting topic-specific dialogue flows, and give details on our dialogue management schemes and scoring mechanisms. Finally we briefly evaluate the performance of our system and observe the challenges that an open domain socialbot faces.

* Alexa Prize Proceedings 2017 

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Combining Search with Structured Data to Create a More Engaging User Experience in Open Domain Dialogue

Sep 15, 2017
Kevin K. Bowden, Shereen Oraby, Jiaqi Wu, Amita Misra, Marilyn Walker

The greatest challenges in building sophisticated open-domain conversational agents arise directly from the potential for ongoing mixed-initiative multi-turn dialogues, which do not follow a particular plan or pursue a particular fixed information need. In order to make coherent conversational contributions in this context, a conversational agent must be able to track the types and attributes of the entities under discussion in the conversation and know how they are related. In some cases, the agent can rely on structured information sources to help identify the relevant semantic relations and produce a turn, but in other cases, the only content available comes from search, and it may be unclear which semantic relations hold between the search results and the discourse context. A further constraint is that the system must produce its contribution to the ongoing conversation in real-time. This paper describes our experience building SlugBot for the 2017 Alexa Prize, and discusses how we leveraged search and structured data from different sources to help SlugBot produce dialogic turns and carry on conversations whose length over the semi-finals user evaluation period averaged 8:17 minutes.

* SCAI 2017 

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Data-Driven Dialogue Systems for Social Agents

Sep 10, 2017
Kevin K. Bowden, Shereen Oraby, Amita Misra, Jiaqi Wu, Stephanie Lukin

In order to build dialogue systems to tackle the ambitious task of holding social conversations, we argue that we need a data driven approach that includes insight into human conversational chit chat, and which incorporates different natural language processing modules. Our strategy is to analyze and index large corpora of social media data, including Twitter conversations, online debates, dialogues between friends, and blog posts, and then to couple this data retrieval with modules that perform tasks such as sentiment and style analysis, topic modeling, and summarization. We aim for personal assistants that can learn more nuanced human language, and to grow from task-oriented agents to more personable social bots.

* IWSDS 2017 

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Validation of a deep learning mammography model in a population with low screening rates

Nov 01, 2019
Kevin Wu, Eric Wu, Yaping Wu, Hongna Tan, Greg Sorensen, Meiyun Wang, Bill Lotter

A key promise of AI applications in healthcare is in increasing access to quality medical care in under-served populations and emerging markets. However, deep learning models are often only trained on data from advantaged populations that have the infrastructure and resources required for large-scale data collection. In this paper, we aim to empirically investigate the potential impact of such biases on breast cancer detection in mammograms. We specifically explore how a deep learning algorithm trained on screening mammograms from the US and UK generalizes to mammograms collected at a hospital in China, where screening is not widely implemented. For the evaluation, we use a top-scoring model developed for the Digital Mammography DREAM Challenge. Despite the change in institution and population composition, we find that the model generalizes well, exhibiting similar performance to that achieved in the DREAM Challenge, even when controlling for tumor size. We also illustrate a simple but effective method for filtering predictions based on model variance, which can be particularly useful for deployment in new settings. While there are many components in developing a clinically effective system, these results represent a promising step towards increasing access to life-saving screening mammography in populations where screening rates are currently low.

* NeurIPS 2019. Fair ML for Health Workshop 

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Implicit Discourse Relation Identification for Open-domain Dialogues

Jul 09, 2019
Mingyu Derek Ma, Kevin K. Bowden, Jiaqi Wu, Wen Cui, Marilyn Walker

Discourse relation identification has been an active area of research for many years, and the challenge of identifying implicit relations remains largely an unsolved task, especially in the context of an open-domain dialogue system. Previous work primarily relies on a corpora of formal text which is inherently non-dialogic, i.e., news and journals. This data however is not suitable to handle the nuances of informal dialogue nor is it capable of navigating the plethora of valid topics present in open-domain dialogue. In this paper, we designed a novel discourse relation identification pipeline specifically tuned for open-domain dialogue systems. We firstly propose a method to automatically extract the implicit discourse relation argument pairs and labels from a dataset of dialogic turns, resulting in a novel corpus of discourse relation pairs; the first of its kind to attempt to identify the discourse relations connecting the dialogic turns in open-domain discourse. Moreover, we have taken the first steps to leverage the dialogue features unique to our task to further improve the identification of such relations by performing feature ablation and incorporating dialogue features to enhance the state-of-the-art model.

* To appear in Proceedings of the 57th Annual Meeting of the Association for Computational Linguistics (ACL2019) 

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Resolution enhancement in scanning electron microscopy using deep learning

Jan 30, 2019
Kevin de Haan, Zachary S. Ballard, Yair Rivenson, Yichen Wu, Aydogan Ozcan

We report resolution enhancement in scanning electron microscopy (SEM) images using a generative adversarial network. We demonstrate the veracity of this deep learning-based super-resolution technique by inferring unresolved features in low-resolution SEM images and comparing them with the accurately co-registered high-resolution SEM images of the same samples. Through spatial frequency analysis, we also report that our method generates images with frequency spectra matching higher resolution SEM images of the same fields-of-view. By using this technique, higher resolution SEM images can be taken faster, while also reducing both electron charging and damage to the samples.

* 8 pages, 4 figures 

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POP-CNN: Predicting Odor's Pleasantness with Convolutional Neural Network

Mar 19, 2019
Danli Wu, Yu Cheng, Dehan Luo, Kin-Yeung Wong, Kevin Hung, Zhijing Yang

Predicting odor's pleasantness simplifies the evaluation of odors and has the potential to be applied in perfumes and environmental monitoring industry. Classical algorithms for predicting odor's pleasantness generally use a manual feature extractor and an independent classifier. Manual designing a good feature extractor depend on expert knowledge and experience is the key to the accuracy of the algorithms. In order to circumvent this difficulty, we proposed a model for predicting odor's pleasantness by using convolutional neural network. In our model, the convolutional neural layers replace manual feature extractor and show better performance. The experiments show that the correlation between our model and human is over 90% on pleasantness rating. And our model has 99.9% accuracy in distinguishing between absolutely pleasant or unpleasant odors.


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Continuous Integration of Machine Learning Models with ease.ml/ci: Towards a Rigorous Yet Practical Treatment

Mar 01, 2019
Cedric Renggli, Bojan Karlaš, Bolin Ding, Feng Liu, Kevin Schawinski, Wentao Wu, Ce Zhang

Continuous integration is an indispensable step of modern software engineering practices to systematically manage the life cycles of system development. Developing a machine learning model is no difference - it is an engineering process with a life cycle, including design, implementation, tuning, testing, and deployment. However, most, if not all, existing continuous integration engines do not support machine learning as first-class citizens. In this paper, we present ease.ml/ci, to our best knowledge, the first continuous integration system for machine learning. The challenge of building ease.ml/ci is to provide rigorous guarantees, e.g., single accuracy point error tolerance with 0.999 reliability, with a practical amount of labeling effort, e.g., 2K labels per test. We design a domain specific language that allows users to specify integration conditions with reliability constraints, and develop simple novel optimizations that can lower the number of labels required by up to two orders of magnitude for test conditions popularly used in real production systems.


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Semantic Context Forests for Learning-Based Knee Cartilage Segmentation in 3D MR Images

Apr 22, 2014
Quan Wang, Dijia Wu, Le Lu, Meizhu Liu, Kim L. Boyer, Shaohua Kevin Zhou

The automatic segmentation of human knee cartilage from 3D MR images is a useful yet challenging task due to the thin sheet structure of the cartilage with diffuse boundaries and inhomogeneous intensities. In this paper, we present an iterative multi-class learning method to segment the femoral, tibial and patellar cartilage simultaneously, which effectively exploits the spatial contextual constraints between bone and cartilage, and also between different cartilages. First, based on the fact that the cartilage grows in only certain area of the corresponding bone surface, we extract the distance features of not only to the surface of the bone, but more informatively, to the densely registered anatomical landmarks on the bone surface. Second, we introduce a set of iterative discriminative classifiers that at each iteration, probability comparison features are constructed from the class confidence maps derived by previously learned classifiers. These features automatically embed the semantic context information between different cartilages of interest. Validated on a total of 176 volumes from the Osteoarthritis Initiative (OAI) dataset, the proposed approach demonstrates high robustness and accuracy of segmentation in comparison with existing state-of-the-art MR cartilage segmentation methods.

* MICCAI 2013: Workshop on Medical Computer Vision 

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Deep learning-based color holographic microscopy

Jul 15, 2019
Tairan Liu, Zhensong Wei, Yair Rivenson, Kevin de Haan, Yibo Zhang, Yichen Wu, Aydogan Ozcan

We report a framework based on a generative adversarial network (GAN) that performs high-fidelity color image reconstruction using a single hologram of a sample that is illuminated simultaneously by light at three different wavelengths. The trained network learns to eliminate missing-phase-related artifacts, and generates an accurate color transformation for the reconstructed image. Our framework is experimentally demonstrated using lung and prostate tissue sections that are labeled with different histological stains. This framework is envisaged to be applicable to point-of-care histopathology, and presents a significant improvement in the throughput of coherent microscopy systems given that only a single hologram of the specimen is required for accurate color imaging.

* Journal of Biophotonics (2019) 
* 25 pages, 8 Figures, 2 Tables 

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Cross-modality deep learning brings bright-field microscopy contrast to holography

Nov 17, 2018
Yichen Wu, Yilin Luo, Gunvant Chaudhari, Yair Rivenson, Ayfer Calis, Kevin De Haan, Aydogan Ozcan

Deep learning brings bright-field microscopy contrast to holographic images of a sample volume, bridging the volumetric imaging capability of holography with the speckle- and artifact-free image contrast of bright-field incoherent microscopy.

* 3 pages 

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