Research papers and code for "Panos Stinis":
We assume that we are given a time series of data from a dynamical system and our task is to learn the flow map of the dynamical system. We present a collection of results on how to enforce constraints coming from the dynamical system in order to accelerate the training of deep neural networks to represent the flow map of the system as well as increase their predictive ability. In particular, we provide ways to enforce constraints during training for all three major modes of learning, namely supervised, unsupervised and reinforcement learning. In general, the dynamic constraints need to include terms which are analogous to memory terms in model reduction formalisms. Such memory terms act as a restoring force which corrects the errors committed by the learned flow map during prediction. For supervised learning, the constraints are added to the objective function. For the case of unsupervised learning, in particular generative adversarial networks, the constraints are introduced by augmenting the input of the discriminator. Finally, for the case of reinforcement learning and in particular actor-critic methods, the constraints are added to the reward function. In addition, for the reinforcement learning case, we present a novel approach based on homotopy of the action-value function in order to stabilize and accelerate training. We use numerical results for the Lorenz system to illustrate the various constructions.

* 30 pages, 5 figures
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As deep neural networks grow in size, from thousands to millions to billions of weights, the performance of those networks becomes limited by our ability to accurately train them. A common naive question arises: if we have a system with billions of degrees of freedom, don't we also need billions of samples to train it? Of course, the success of deep learning indicates that reliable models can be learned with reasonable amounts of data. Similar questions arise in protein folding, spin glasses and biological neural networks. With effectively infinite potential folding/spin/wiring configurations, how does the system find the precise arrangement that leads to useful and robust results? Simple sampling of the possible configurations until an optimal one is reached is not a viable option even if one waited for the age of the universe. On the contrary, there appears to be a mechanism in the above phenomena that forces them to achieve configurations that live on a low-dimensional manifold, avoiding the curse of dimensionality. In the current work we use the concept of mutual information between successive layers of a deep neural network to elucidate this mechanism and suggest possible ways of exploiting it to accelerate training. We show that adding structure to the neural network that enforces higher mutual information between layers speeds training and leads to more accurate results. High mutual information between layers implies that the effective number of free parameters is exponentially smaller than the raw number of tunable weights.

* The material is based on a poster from the 15th Neural Computation and Psychology Workshop "Contemporary Neural Network Models: Machine Learning, Artificial Intelligence, and Cognition" August 8-9, 2016, Drexel University, Philadelphia, PA, USA
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We investigate the use of discrete and continuous versions of physics-informed neural network methods for learning unknown dynamics or constitutive relations of a dynamical system. For the case of unknown dynamics, we represent all the dynamics with a deep neural network (DNN). When the dynamics of the system are known up to the specification of constitutive relations (that can depend on the state of the system), we represent these constitutive relations with a DNN. The discrete versions combine classical multistep discretization methods for dynamical systems with neural network based machine learning methods. On the other hand, the continuous versions utilize deep neural networks to minimize the residual function for the continuous governing equations. We use the case of a fedbatch bioreactor system to study the effectiveness of these approaches and discuss conditions for their applicability. Our results indicate that the accuracy of the trained neural network models is much higher for the cases where we only have to learn a constitutive relation instead of the whole dynamics. This finding corroborates the well-known fact from scientific computing that building as much structural information is available into an algorithm can enhance its efficiency and/or accuracy.

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Generative Adversarial Networks (GANs) are becoming popular choices for unsupervised learning. At the same time there is a concerted effort in the machine learning community to expand the range of tasks in which learning can be applied as well as to utilize methods from other disciplines to accelerate learning. With this in mind, in the current work we suggest ways to enforce given constraints in the output of a GAN both for interpolation and extrapolation. The two cases need to be treated differently. For the case of interpolation, the incorporation of constraints is built into the training of the GAN. The incorporation of the constraints respects the primary game-theoretic setup of a GAN so it can be combined with existing algorithms. However, it can exacerbate the problem of instability during training that is well-known for GANs. We suggest adding small noise to the constraints as a simple remedy that has performed well in our numerical experiments. The case of extrapolation (prediction) is more involved. First, we employ a modified interpolation training process that uses noisy data but does not necessarily enforce the constraints during training. Second, the resulting modified interpolator is used for extrapolation where the constraints are enforced after each step through projection on the space of constraints.

* 29 pages
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We solve a system of ordinary differential equations with an unknown functional form of a sink (reaction rate) term. We assume that the measurements (time series) of state variables are partially available, and we use recurrent neural network to "learn" the reaction rate from this data. This is achieved by including a discretized ordinary differential equations as part of a recurrent neural network training problem. We extend TensorFlow's recurrent neural network architecture to create a simple but scalable and effective solver for the unknown functions, and apply it to a fedbatch bioreactor simulation problem. Use of techniques from recent deep learning literature enables training of functions with behavior manifesting over thousands of time steps. Our networks are structurally similar to recurrent neural networks, but differences in design and function require modifications to the conventional wisdom about training such networks.

* 19 pages, 8 figures
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