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Add to EdgeSynthesizing Multi-Tracer PET Images for Alzheimer's Disease Patients using a 3D Unified Anatomy-aware Cyclic Adversarial Network
Jul 12, 2021
Positron Emission Tomography (PET) is an important tool for studying Alzheimer's disease (AD). PET scans can be used as diagnostics tools, and to provide molecular characterization of patients with cognitive disorders. However, multiple tracers are needed to measure glucose metabolism (18F-FDG), synaptic vesicle protein (11C-UCB-J), and $\beta$-amyloid (11C-PiB). Administering multiple tracers to patient will lead to high radiation dose and cost. In addition, access to PET scans using new or less-available tracers with sophisticated production methods and short half-life isotopes may be very limited. Thus, it is desirable to develop an efficient multi-tracer PET synthesis model that can generate multi-tracer PET from single-tracer PET. Previous works on medical image synthesis focus on one-to-one fixed domain translations, and cannot simultaneously learn the feature from multi-tracer domains. Given 3 or more tracers, relying on previous methods will also create a heavy burden on the number of models to be trained. To tackle these issues, we propose a 3D unified anatomy-aware cyclic adversarial network (UCAN) for translating multi-tracer PET volumes with one unified generative model, where MR with anatomical information is incorporated. Evaluations on a multi-tracer PET dataset demonstrate the feasibility that our UCAN can generate high-quality multi-tracer PET volumes, with NMSE less than 15% for all PET tracers.
A Novel Loss Function Incorporating Imaging Acquisition Physics for PET Attenuation Map Generation using Deep Learning
Sep 03, 2019
In PET/CT imaging, CT is used for PET attenuation correction (AC). Mismatch between CT and PET due to patient body motion results in AC artifacts. In addition, artifact caused by metal, beam-hardening and count-starving in CT itself also introduces inaccurate AC for PET. Maximum likelihood reconstruction of activity and attenuation (MLAA) was proposed to solve those issues by simultaneously reconstructing tracer activity ($\lambda$-MLAA) and attenuation map ($\mu$-MLAA) based on the PET raw data only. However, $\mu$-MLAA suffers from high noise and $\lambda$-MLAA suffers from large bias as compared to the reconstruction using the CT-based attenuation map ($\mu$-CT). Recently, a convolutional neural network (CNN) was applied to predict the CT attenuation map ($\mu$-CNN) from $\lambda$-MLAA and $\mu$-MLAA, in which an image-domain loss (IM-loss) function between the $\mu$-CNN and the ground truth $\mu$-CT was used. However, IM-loss does not directly measure the AC errors according to the PET attenuation physics, where the line-integral projection of the attenuation map ($\mu$) along the path of the two annihilation events, instead of the $\mu$ itself, is used for AC. Therefore, a network trained with the IM-loss may yield suboptimal performance in the $\mu$ generation. Here, we propose a novel line-integral projection loss (LIP-loss) function that incorporates the PET attenuation physics for $\mu$ generation. Eighty training and twenty testing datasets of whole-body 18F-FDG PET and paired ground truth $\mu$-CT were used. Quantitative evaluations showed that the model trained with the additional LIP-loss was able to significantly outperform the model trained solely based on the IM-loss function.