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Add to EdgeRebecca J. Shipley
Reproducibility of an airway tapering measurement in CT with application to bronchiectasis
Sep 16, 2019
Purpose: This paper proposes a pipeline to acquire a scalar tapering measurement from the carina to the most distal point of an individual airway visible on CT. We show the applicability of using tapering measurements on clinically acquired data by quantifying the reproducibility of the tapering measure. Methods: We generate a spline from the centreline of an airway to measure the area and arclength at contiguous intervals. The tapering measurement is the gradient of the linear regression between area in log space and arclength. The reproducibility of the measure was assessed by analysing different radiation doses, voxel sizes and reconstruction kernel on single timepoint and longitudinal CT scans and by evaluating the effct of airway bifurcations. Results: Using 74 airways from 10 CT scans, we show a statistical difference, p = 3.4 $\times$ 10$^{-4}$ in tapering between healthy airways (n = 35) and those affected by bronchiectasis (n = 39). The difference between the mean of the two populations was 0.011mm$^{-1}$ and the difference between the medians of the two populations was 0.006mm$^{-1}$. The tapering measurement retained a 95\% confidence interval of $\pm$0.005mm$^{-1}$ in a simulated 25 mAs scan and retained a 95% confidence of $\pm$0.005mm$^{-1}$ on simulated CTs up to 1.5 times the original voxel size. Conclusion: We have established an estimate of the precision of the tapering measurement and estimated the effect on precision of simulated voxel size and CT scan dose. We recommend that the scanner calibration be undertaken with the phantoms as described, on the specific CT scanner, radiation dose and reconstruction algorithm that is to be used in any quantitative studies. Our code is available at https://github.com/quan14/AirwayTaperingInCT
* 55 pages, 18 figures, The manuscript was originally published in Journal of Medical Imaging
Tapering Analysis of Airways with Bronchiectasis
Sep 14, 2019Bronchiectasis is the permanent dilation of airways. Patients with the disease can suffer recurrent exacerbations, reducing their quality of life. The gold standard to diagnose and monitor bronchiectasis is accomplished by inspection of chest computed tomography (CT) scans. A clinician examines the broncho-arterial ratio to determine if an airway is brochiectatic. The visual analysis assumes the blood vessel diameter remains constant, although this assumption is disputed in the literature. We propose a simple measurement of tapering along the airways to diagnose and monitor bronchiectasis. To this end, we constructed a pipeline to measure the cross-sectional area along the airways at contiguous intervals, starting from the carina to the most distal point observable. Using a phantom with calibrated 3D printed structures, the precision and accuracy of our algorithm extends to the sub voxel level. The tapering measurement is robust to bifurcations along the airway and was applied to chest CT images acquired in clinical practice. The result is a statistical difference in tapering rate between airways with bronchiectasis and controls. Our code is available at https://github.com/quan14/AirwayTaperingInCT.
* 12 pages, 7 figures. Previously submitted for SPIE Medical Imaging, 2018, Houston, Texas, United States