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CycleINR: Cycle Implicit Neural Representation for Arbitrary-Scale Volumetric Super-Resolution of Medical Data
Apr 07, 2024
In the realm of medical 3D data, such as CT and MRI images, prevalent anisotropic resolution is characterized by high intra-slice but diminished inter-slice resolution. The lowered resolution between adjacent slices poses challenges, hindering optimal viewing experiences and impeding the development of robust downstream analysis algorithms. Various volumetric super-resolution algorithms aim to surmount these challenges, enhancing inter-slice resolution and overall 3D medical imaging quality. However, existing approaches confront inherent challenges: 1) often tailored to specific upsampling factors, lacking flexibility for diverse clinical scenarios; 2) newly generated slices frequently suffer from over-smoothing, degrading fine details, and leading to inter-slice inconsistency. In response, this study presents CycleINR, a novel enhanced Implicit Neural Representation model for 3D medical data volumetric super-resolution. Leveraging the continuity of the learned implicit function, the CycleINR model can achieve results with arbitrary up-sampling rates, eliminating the need for separate training. Additionally, we enhance the grid sampling in CycleINR with a local attention mechanism and mitigate over-smoothing by integrating cycle-consistent loss. We introduce a new metric, Slice-wise Noise Level Inconsistency (SNLI), to quantitatively assess inter-slice noise level inconsistency. The effectiveness of our approach is demonstrated through image quality evaluations on an in-house dataset and a downstream task analysis on the Medical Segmentation Decathlon liver tumor dataset.
Incorporating Graph Attention Mechanism into Geometric Problem Solving Based on Deep Reinforcement Learning
Mar 14, 2024In the context of online education, designing an automatic solver for geometric problems has been considered a crucial step towards general math Artificial Intelligence (AI), empowered by natural language understanding and traditional logical inference. In most instances, problems are addressed by adding auxiliary components such as lines or points. However, adding auxiliary components automatically is challenging due to the complexity in selecting suitable auxiliary components especially when pivotal decisions have to be made. The state-of-the-art performance has been achieved by exhausting all possible strategies from the category library to identify the one with the maximum likelihood. However, an extensive strategy search have to be applied to trade accuracy for ef-ficiency. To add auxiliary components automatically and efficiently, we present deep reinforcement learning framework based on the language model, such as BERT. We firstly apply the graph attention mechanism to reduce the strategy searching space, called AttnStrategy, which only focus on the conclusion-related components. Meanwhile, a novel algorithm, named Automatically Adding Auxiliary Components using Reinforcement Learning framework (A3C-RL), is proposed by forcing an agent to select top strategies, which incorporates the AttnStrategy and BERT as the memory components. Results from extensive experiments show that the proposed A3C-RL algorithm can substantially enhance the average precision by 32.7% compared to the traditional MCTS. In addition, the A3C-RL algorithm outperforms humans on the geometric questions from the annual University Entrance Mathematical Examination of China.
Optimal ANN-SNN Conversion with Group Neurons
Feb 29, 2024Spiking Neural Networks (SNNs) have emerged as a promising third generation of neural networks, offering unique characteristics such as binary outputs, high sparsity, and biological plausibility. However, the lack of effective learning algorithms remains a challenge for SNNs. For instance, while converting artificial neural networks (ANNs) to SNNs circumvents the need for direct training of SNNs, it encounters issues related to conversion errors and high inference time delays. In order to reduce or even eliminate conversion errors while decreasing inference time-steps, we have introduced a novel type of neuron called Group Neurons (GNs). One GN is composed of multiple Integrate-and-Fire (IF) neurons as members, and its neural dynamics are meticulously designed. Based on GNs, we have optimized the traditional ANN-SNN conversion framework. Specifically, we replace the IF neurons in the SNNs obtained by the traditional conversion framework with GNs. The resulting SNNs, which utilize GNs, are capable of achieving accuracy levels comparable to ANNs even within extremely short inference time-steps. The experiments on CIFAR10, CIFAR100, and ImageNet datasets demonstrate the superiority of the proposed methods in terms of both inference accuracy and latency. Code is available at https://github.com/Lyu6PosHao/ANN2SNN_GN.
Spikformer V2: Join the High Accuracy Club on ImageNet with an SNN Ticket
Jan 04, 2024Spiking Neural Networks (SNNs), known for their biologically plausible architecture, face the challenge of limited performance. The self-attention mechanism, which is the cornerstone of the high-performance Transformer and also a biologically inspired structure, is absent in existing SNNs. To this end, we explore the potential of leveraging both self-attention capability and biological properties of SNNs, and propose a novel Spiking Self-Attention (SSA) and Spiking Transformer (Spikformer). The SSA mechanism eliminates the need for softmax and captures the sparse visual feature employing spike-based Query, Key, and Value. This sparse computation without multiplication makes SSA efficient and energy-saving. Further, we develop a Spiking Convolutional Stem (SCS) with supplementary convolutional layers to enhance the architecture of Spikformer. The Spikformer enhanced with the SCS is referred to as Spikformer V2. To train larger and deeper Spikformer V2, we introduce a pioneering exploration of Self-Supervised Learning (SSL) within the SNN. Specifically, we pre-train Spikformer V2 with masking and reconstruction style inspired by the mainstream self-supervised Transformer, and then finetune the Spikformer V2 on the image classification on ImageNet. Extensive experiments show that Spikformer V2 outperforms other previous surrogate training and ANN2SNN methods. An 8-layer Spikformer V2 achieves an accuracy of 80.38% using 4 time steps, and after SSL, a 172M 16-layer Spikformer V2 reaches an accuracy of 81.10% with just 1 time step. To the best of our knowledge, this is the first time that the SNN achieves 80+% accuracy on ImageNet. The code will be available at Spikformer V2.
SpikingJelly: An open-source machine learning infrastructure platform for spike-based intelligence
Oct 25, 2023Spiking neural networks (SNNs) aim to realize brain-inspired intelligence on neuromorphic chips with high energy efficiency by introducing neural dynamics and spike properties. As the emerging spiking deep learning paradigm attracts increasing interest, traditional programming frameworks cannot meet the demands of the automatic differentiation, parallel computation acceleration, and high integration of processing neuromorphic datasets and deployment. In this work, we present the SpikingJelly framework to address the aforementioned dilemma. We contribute a full-stack toolkit for pre-processing neuromorphic datasets, building deep SNNs, optimizing their parameters, and deploying SNNs on neuromorphic chips. Compared to existing methods, the training of deep SNNs can be accelerated $11\times$, and the superior extensibility and flexibility of SpikingJelly enable users to accelerate custom models at low costs through multilevel inheritance and semiautomatic code generation. SpikingJelly paves the way for synthesizing truly energy-efficient SNN-based machine intelligence systems, which will enrich the ecology of neuromorphic computing.
Analyzing and controlling diversity in quantum-behaved particle swarm optimization
Aug 09, 2023
This paper addresses the issues of controlling and analyzing the population diversity in quantum-behaved particle swarm optimization (QPSO), which is an optimization approach motivated by concepts in quantum mechanics and PSO. In order to gain an in-depth understanding of the role the diversity plays in the evolving process, we first define the genotype diversity by the distance to the average point of the particles' positions and the phenotype diversity by the fitness values for the QPSO. Then, the correlations between the two types of diversities and the search performance are tested and analyzed on several benchmark functions, and the distance-to-average-point diversity is showed to have stronger association with the search performance during the evolving processes. Finally, in the light of the performed diversity analyses, two strategies for controlling the distance-to-average-point diversities are proposed for the purpose of improving the search ability of the QPSO algorithm. Empirical studies on the QPSO with the introduced diversity control methods are performed on a set of benchmark functions from the CEC 2005 benchmark suite. The performance of the proposed methods are evaluated and compared with the original QPSO and other PSO variants.
Auto-Spikformer: Spikformer Architecture Search
Jun 01, 2023
The integration of self-attention mechanisms into Spiking Neural Networks (SNNs) has garnered considerable interest in the realm of advanced deep learning, primarily due to their biological properties. Recent advancements in SNN architecture, such as Spikformer, have demonstrated promising outcomes by leveraging Spiking Self-Attention (SSA) and Spiking Patch Splitting (SPS) modules. However, we observe that Spikformer may exhibit excessive energy consumption, potentially attributable to redundant channels and blocks. To mitigate this issue, we propose Auto-Spikformer, a one-shot Transformer Architecture Search (TAS) method, which automates the quest for an optimized Spikformer architecture. To facilitate the search process, we propose methods Evolutionary SNN neurons (ESNN), which optimizes the SNN parameters, and apply the previous method of weight entanglement supernet training, which optimizes the Vision Transformer (ViT) parameters. Moreover, we propose an accuracy and energy balanced fitness function $\mathcal{F}_{AEB}$ that jointly considers both energy consumption and accuracy, and aims to find a Pareto optimal combination that balances these two objectives. Our experimental results demonstrate the effectiveness of Auto-Spikformer, which outperforms the state-of-the-art method including CNN or ViT models that are manually or automatically designed while significantly reducing energy consumption.
Expand, Rerank, and Retrieve: Query Reranking for Open-Domain Question Answering
May 26, 2023
We propose EAR, a query Expansion And Reranking approach for improving passage retrieval, with the application to open-domain question answering. EAR first applies a query expansion model to generate a diverse set of queries, and then uses a query reranker to select the ones that could lead to better retrieval results. Motivated by the observation that the best query expansion often is not picked by greedy decoding, EAR trains its reranker to predict the rank orders of the gold passages when issuing the expanded queries to a given retriever. By connecting better the query expansion model and retriever, EAR significantly enhances a traditional sparse retrieval method, BM25. Empirically, EAR improves top-5/20 accuracy by 3-8 and 5-10 points in in-domain and out-of-domain settings, respectively, when compared to a vanilla query expansion model, GAR, and a dense retrieval model, DPR.
Temporal Contrastive Learning for Spiking Neural Networks
May 23, 2023
Biologically inspired spiking neural networks (SNNs) have garnered considerable attention due to their low-energy consumption and spatio-temporal information processing capabilities. Most existing SNNs training methods first integrate output information across time steps, then adopt the cross-entropy (CE) loss to supervise the prediction of the average representations. However, in this work, we find the method above is not ideal for the SNNs training as it omits the temporal dynamics of SNNs and degrades the performance quickly with the decrease of inference time steps. One tempting method to model temporal correlations is to apply the same label supervision at each time step and treat them identically. Although it can acquire relatively consistent performance across various time steps, it still faces challenges in obtaining SNNs with high performance. Inspired by these observations, we propose Temporal-domain supervised Contrastive Learning (TCL) framework, a novel method to obtain SNNs with low latency and high performance by incorporating contrastive supervision with temporal domain information. Contrastive learning (CL) prompts the network to discern both consistency and variability in the representation space, enabling it to better learn discriminative and generalizable features. We extend this concept to the temporal domain of SNNs, allowing us to flexibly and fully leverage the correlation between representations at different time steps. Furthermore, we propose a Siamese Temporal-domain supervised Contrastive Learning (STCL) framework to enhance the SNNs via augmentation, temporal and class constraints simultaneously. Extensive experimental results demonstrate that SNNs trained by our TCL and STCL can achieve both high performance and low latency, achieving state-of-the-art performance on a variety of datasets (e.g., CIFAR-10, CIFAR-100, and DVS-CIFAR10).
Parallel Spiking Neurons with High Efficiency and Long-term Dependencies Learning Ability
Apr 25, 2023
Vanilla spiking neurons in Spiking Neural Networks (SNNs) use charge-fire-reset neuronal dynamics, which can only be simulated in serial and can hardly learn long-time dependencies. We find that when removing reset, the neuronal dynamics are reformulated in a non-iterative form and can be parallelized. By rewriting neuronal dynamics without resetting to a general formulation, we propose the Parallel Spiking Neuron (PSN), which uses dense connections between time-steps to maximize the utilization of temporal information. To avoid the use of future inputs for low-latency inference, we add masks on the weights and obtain the masked PSN. By sharing weights across time-steps, the sliding PSN is proposed with the ability to deal with sequences with variant lengths. We evaluate the PSN family on simulation speed and temporal/static data classification, and the results show the overwhelming advantage of the PSN family in efficiency and accuracy. To our best knowledge, this is the first research about parallelizing spiking neurons and can be a cornerstone for the spiking deep learning community. Our codes are available at \url{https://github.com/fangwei123456/Parallel-Spiking-Neuron}.