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The Blessings of Multiple Treatments and Outcomes in Treatment Effect Estimation
Oct 14, 2023
Assessing causal effects in the presence of unobserved confounding is a challenging problem. Existing studies leveraged proxy variables or multiple treatments to adjust for the confounding bias. In particular, the latter approach attributes the impact on a single outcome to multiple treatments, allowing estimating latent variables for confounding control. Nevertheless, these methods primarily focus on a single outcome, whereas in many real-world scenarios, there is greater interest in studying the effects on multiple outcomes. Besides, these outcomes are often coupled with multiple treatments. Examples include the intensive care unit (ICU), where health providers evaluate the effectiveness of therapies on multiple health indicators. To accommodate these scenarios, we consider a new setting dubbed as multiple treatments and multiple outcomes. We then show that parallel studies of multiple outcomes involved in this setting can assist each other in causal identification, in the sense that we can exploit other treatments and outcomes as proxies for each treatment effect under study. We proceed with a causal discovery method that can effectively identify such proxies for causal estimation. The utility of our method is demonstrated in synthetic data and sepsis disease.
Exploring Counterfactual Alignment Loss towards Human-centered AI
Oct 03, 2023Deep neural networks have demonstrated impressive accuracy in supervised learning tasks. However, their lack of transparency makes it hard for humans to trust their results, especially in safe-critic domains such as healthcare. To address this issue, recent explanation-guided learning approaches proposed to align the gradient-based attention map to image regions annotated by human experts, thereby obtaining an intrinsically human-centered model. However, the attention map these methods are based on may fail to causally attribute the model predictions, thus compromising their validity for alignment. To address this issue, we propose a novel human-centered framework based on counterfactual generation. In particular, we utilize the counterfactual generation's ability for causal attribution to introduce a novel loss called the CounterFactual Alignment (CF-Align) loss. This loss guarantees that the features attributed by the counterfactual generation for the classifier align with the human annotations. To optimize the proposed loss that entails a counterfactual generation with an implicit function form, we leverage the implicit function theorem for backpropagation. Our method is architecture-agnostic and, therefore can be applied to any neural network. We demonstrate the effectiveness of our method on a lung cancer diagnosis dataset, showcasing faithful alignment to humans.
Doubly Robust Proximal Causal Learning for Continuous Treatments
Sep 22, 2023
Proximal causal learning is a promising framework for identifying the causal effect under the existence of unmeasured confounders. Within this framework, the doubly robust (DR) estimator was derived and has shown its effectiveness in estimation, especially when the model assumption is violated. However, the current form of the DR estimator is restricted to binary treatments, while the treatment can be continuous in many real-world applications. The primary obstacle to continuous treatments resides in the delta function present in the original DR estimator, making it infeasible in causal effect estimation and introducing a heavy computational burden in nuisance function estimation. To address these challenges, we propose a kernel-based DR estimator that can well handle continuous treatments. Equipped with its smoothness, we show that its oracle form is a consistent approximation of the influence function. Further, we propose a new approach to efficiently solve the nuisance functions. We then provide a comprehensive convergence analysis in terms of the mean square error. We demonstrate the utility of our estimator on synthetic datasets and real-world applications.
DIVERSIFY: A General Framework for Time Series Out-of-distribution Detection and Generalization
Aug 04, 2023
Time series remains one of the most challenging modalities in machine learning research. The out-of-distribution (OOD) detection and generalization on time series tend to suffer due to its non-stationary property, i.e., the distribution changes over time. The dynamic distributions inside time series pose great challenges to existing algorithms to identify invariant distributions since they mainly focus on the scenario where the domain information is given as prior knowledge. In this paper, we attempt to exploit subdomains within a whole dataset to counteract issues induced by non-stationary for generalized representation learning. We propose DIVERSIFY, a general framework, for OOD detection and generalization on dynamic distributions of time series. DIVERSIFY takes an iterative process: it first obtains the "worst-case" latent distribution scenario via adversarial training, then reduces the gap between these latent distributions. We implement DIVERSIFY via combining existing OOD detection methods according to either extracted features or outputs of models for detection while we also directly utilize outputs for classification. In addition, theoretical insights illustrate that DIVERSIFY is theoretically supported. Extensive experiments are conducted on seven datasets with different OOD settings across gesture recognition, speech commands recognition, wearable stress and affect detection, and sensor-based human activity recognition. Qualitative and quantitative results demonstrate that DIVERSIFY learns more generalized features and significantly outperforms other baselines.
Causal Discovery with Unobserved Variables: A Proxy Variable Approach
May 24, 2023
Discovering causal relations from observational data is important. The existence of unobserved variables, such as latent confounders or mediators, can mislead the causal identification. To address this issue, proximal causal discovery methods proposed to adjust for the bias with the proxy of the unobserved variable. However, these methods presumed the data is discrete, which limits their real-world application. In this paper, we propose a proximal causal discovery method that can well handle the continuous variables. Our observation is that discretizing continuous variables can can lead to serious errors and comprise the power of the proxy. Therefore, to use proxy variables in the continuous case, the critical point is to control the discretization error. To this end, we identify mild regularity conditions on the conditional distributions, enabling us to control the discretization error to an infinitesimal level, as long as the proxy is discretized with sufficiently fine, finite bins. Based on this, we design a proxy-based hypothesis test for identifying causal relationships when unobserved variables are present. Our test is consistent, meaning it has ideal power when large samples are available. We demonstrate the effectiveness of our method using synthetic and real-world data.
Causal Discovery from Subsampled Time Series with Proxy Variables
May 24, 2023
Inferring causal structures from time series data is the central interest of many scientific inquiries. A major barrier to such inference is the problem of subsampling, i.e., the frequency of measurement is much lower than that of causal influence. To overcome this problem, numerous methods have been proposed, yet either was limited to the linear case or failed to achieve identifiability. In this paper, we propose a constraint-based algorithm that can identify the entire causal structure from subsampled time series, without any parametric constraint. Our observation is that the challenge of subsampling arises mainly from hidden variables at the unobserved time steps. Meanwhile, every hidden variable has an observed proxy, which is essentially itself at some observable time in the future, benefiting from the temporal structure. Based on these, we can leverage the proxies to remove the bias induced by the hidden variables and hence achieve identifiability. Following this intuition, we propose a proxy-based causal discovery algorithm. Our algorithm is nonparametric and can achieve full causal identification. Theoretical advantages are reflected in synthetic and real-world experiments.
Knockoffs-SPR: Clean Sample Selection in Learning with Noisy Labels
Jan 03, 2023
A noisy training set usually leads to the degradation of the generalization and robustness of neural networks. In this paper, we propose a novel theoretically guaranteed clean sample selection framework for learning with noisy labels. Specifically, we first present a Scalable Penalized Regression (SPR) method, to model the linear relation between network features and one-hot labels. In SPR, the clean data are identified by the zero mean-shift parameters solved in the regression model. We theoretically show that SPR can recover clean data under some conditions. Under general scenarios, the conditions may be no longer satisfied; and some noisy data are falsely selected as clean data. To solve this problem, we propose a data-adaptive method for Scalable Penalized Regression with Knockoff filters (Knockoffs-SPR), which is provable to control the False-Selection-Rate (FSR) in the selected clean data. To improve the efficiency, we further present a split algorithm that divides the whole training set into small pieces that can be solved in parallel to make the framework scalable to large datasets. While Knockoffs-SPR can be regarded as a sample selection module for a standard supervised training pipeline, we further combine it with a semi-supervised algorithm to exploit the support of noisy data as unlabeled data. Experimental results on several benchmark datasets and real-world noisy datasets show the effectiveness of our framework and validate the theoretical results of Knockoffs-SPR. Our code and pre-trained models will be released.
PatchMix Augmentation to Identify Causal Features in Few-shot Learning
Nov 29, 2022
The task of Few-shot learning (FSL) aims to transfer the knowledge learned from base categories with sufficient labelled data to novel categories with scarce known information. It is currently an important research question and has great practical values in the real-world applications. Despite extensive previous efforts are made on few-shot learning tasks, we emphasize that most existing methods did not take into account the distributional shift caused by sample selection bias in the FSL scenario. Such a selection bias can induce spurious correlation between the semantic causal features, that are causally and semantically related to the class label, and the other non-causal features. Critically, the former ones should be invariant across changes in distributions, highly related to the classes of interest, and thus well generalizable to novel classes, while the latter ones are not stable to changes in the distribution. To resolve this problem, we propose a novel data augmentation strategy dubbed as PatchMix that can break this spurious dependency by replacing the patch-level information and supervision of the query images with random gallery images from different classes from the query ones. We theoretically show that such an augmentation mechanism, different from existing ones, is able to identify the causal features. To further make these features to be discriminative enough for classification, we propose Correlation-guided Reconstruction (CGR) and Hardness-Aware module for instance discrimination and easier discrimination between similar classes. Moreover, such a framework can be adapted to the unsupervised FSL scenario.
Out-of-Distribution Representation Learning for Time Series Classification
Sep 26, 2022
Time series classification is an important problem in real world. Due to its non-stationary property that the distribution changes over time, it remains challenging to build models for generalization to unseen distributions. In this paper, we propose to view the time series classification problem from the distribution perspective. We argue that the temporal complexity attributes to the unknown latent distributions within. To this end, we propose DIVERSIFY to learn generalized representations for time series classification. DIVERSIFY takes an iterative process: it first obtains the worst-case distribution scenario via adversarial training, then matches the distributions of the obtained sub-domains. We also present some theoretical insights. We conduct experiments on gesture recognition, speech commands recognition, wearable stress and affect detection, and sensor-based human activity recognition with a total of seven datasets in different settings. Results demonstrate that DIVERSIFY significantly outperforms other baselines and effectively characterizes the latent distributions by qualitative and quantitative analysis.
Domain Invariant Model with Graph Convolutional Network for Mammogram Classification
Apr 21, 2022
Due to its safety-critical property, the image-based diagnosis is desired to achieve robustness on out-of-distribution (OOD) samples. A natural way towards this goal is capturing only clinically disease-related features, which is composed of macroscopic attributes (e.g., margins, shapes) and microscopic image-based features (e.g., textures) of lesion-related areas. However, such disease-related features are often interweaved with data-dependent (but disease irrelevant) biases during learning, disabling the OOD generalization. To resolve this problem, we propose a novel framework, namely Domain Invariant Model with Graph Convolutional Network (DIM-GCN), which only exploits invariant disease-related features from multiple domains. Specifically, we first propose a Bayesian network, which explicitly decomposes the latent variables into disease-related and other disease-irrelevant parts that are provable to be disentangled from each other. Guided by this, we reformulate the objective function based on Variational Auto-Encoder, in which the encoder in each domain has two branches: the domain-independent and -dependent ones, which respectively encode disease-related and -irrelevant features. To better capture the macroscopic features, we leverage the observed clinical attributes as a goal for reconstruction, via Graph Convolutional Network (GCN). Finally, we only implement the disease-related features for prediction. The effectiveness and utility of our method are demonstrated by the superior OOD generalization performance over others on mammogram benign/malignant diagnosis.